dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00666
Location and strand information: 697697 - 698518 (-)
Family: 3.A.1.1.39
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00667
Location and strand information: 698531 - 699421 (-)
Family: 3.A.1.1.20
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00668
Location and strand information: 699506 - 700741 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: Cyclodextrin-binding protein

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00669
Location and strand information: 701049 - 703214 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 4.7202
Protein molecular weight: 79288.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00670
Location and strand information: 703488 - 705530 (+)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase BgaP
Protein isoelectric point: 5.6981
Protein molecular weight: 77846.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00671
Location and strand information: 705641 - 706282 (+)
Family: null
Protein type: null
Protein description: Acetylxylan esterase

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00672
Location and strand information: 706622 - 707749 (+)
Family: GntR
Protein type: TF
Protein description: Arabinose metabolism transcriptional repressor

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00673
Location and strand information: 707833 - 708990 (+)
Family: GH43_26|GH43|CBM42
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6444
Protein molecular weight: 44239.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00674
Location and strand information: 709329 - 710660 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: putative arabinose-binding protein

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00675
Location and strand information: 710859 - 712376 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 6.464
Protein molecular weight: 57803.33
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00676
Location and strand information: 712403 - 713407 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00677
Location and strand information: 713408 - 714247 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00678
Location and strand information: 714291 - 714911 (+)
Family: null
Protein type: null
Protein description: putative protein YesV

Gene clsuter ID: MGYG000001470_1|CGC12
Gene ID: MGYG000001470_00679
Location and strand information: 714945 - 716420 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.8217
Protein molecular weight: 55824.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001470_00669	GH3_e106\|3.2.1.-	beta-glucan
MGYG000001470_00670	GH42_e15\|3.2.1.23	arabinogalactan
MGYG000001470_00673	GH43_e17\|CBM42_e13\|3.2.1.55\|3.2.1.-	xylan
MGYG000001470_00675	GH51_e0\|3.2.1.55	arabinan
MGYG000001470_00679	GH51_e14\|3.2.1.55	arabinan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001470_00666	L-arabinose transport system permease protein AraQ	TC	697697	698518	-	3.A.1.1.39
MGYG000001470_00667	Lactose transport system permease protein LacF	TC	698531	699421	-	3.A.1.1.20
MGYG000001470_00668	Cyclodextrin-binding protein	STP	699506	700741	-	SBP_bac_1
MGYG000001470_00669	Beta-glucosidase BoGH3B	CAZyme	701049	703214	+	GH3
MGYG000001470_00670	Beta-galactosidase BgaP	CAZyme	703488	705530	+	GH42
MGYG000001470_00671	Acetylxylan esterase	null	705641	706282	+	Lipase_GDSL_2
MGYG000001470_00672	Arabinose metabolism transcriptional repressor	TF	706622	707749	+	GntR
MGYG000001470_00673	hypothetical protein	CAZyme	707833	708990	+	GH43_26\| GH43\| CBM42
MGYG000001470_00674	putative arabinose-binding protein	TC	709329	710660	+	3.A.1.1.34
MGYG000001470_00675	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	710859	712376	+	GH51
MGYG000001470_00676	L-arabinose transport system permease protein AraP	TC	712403	713407	+	3.A.1.1.34
MGYG000001470_00677	L-arabinose transport system permease protein AraQ	TC	713408	714247	+	3.A.1.1.34
MGYG000001470_00678	putative protein YesV	null	714291	714911	+	DUF624
MGYG000001470_00679	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	714945	716420	+	GH51
Protein ID	Protein Name	Type	Start	End	Strand	Signature